Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Foxe1Q8R2I0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxe1Q8R2I0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxe1Q8R2I0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxe1Q8R2I0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Foxe1Q8R2I0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxe1Q8R2I0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Gm9013-201ENSMUST00000132939 882 ntBASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxe1Q8R2I0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Gm43514-201ENSMUST00000198852 424 ntBASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxe1Q8R2I0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Gm13474-201ENSMUST00000122466 815 ntBASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Gm18958-201ENSMUST00000174258 762 ntBASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Gm27389-201ENSMUST00000183622 195 ntBASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.67■□□□□ 0.58
Foxe1Q8R2I0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Gm29518-201ENSMUST00000190858 372 ntBASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxe1Q8R2I0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Gm21559-201ENSMUST00000220638 855 ntBASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Gm8587-201ENSMUST00000076538 843 ntBASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxe1Q8R2I0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Foxe1Q8R2I0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.64■□□□□ 0.58
Foxe1Q8R2I0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Foxe1Q8R2I0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
Foxe1Q8R2I0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Foxe1Q8R2I0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms