Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CipcQ8R0W1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CipcQ8R0W1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CipcQ8R0W1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CipcQ8R0W1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Gm12896-201ENSMUST00000118430 226 ntBASIC17.07■□□□□ 0.32
CipcQ8R0W1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Gm20760-201ENSMUST00000179197 648 ntBASIC17.07■□□□□ 0.32
CipcQ8R0W1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CipcQ8R0W1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CipcQ8R0W1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.06■□□□□ 0.32
CipcQ8R0W1 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.06■□□□□ 0.32
CipcQ8R0W1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CipcQ8R0W1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Trmt13-210ENSMUST00000198454 880 ntBASIC17.05■□□□□ 0.32
CipcQ8R0W1 Gm2559-201ENSMUST00000201323 363 ntBASIC17.05■□□□□ 0.32
CipcQ8R0W1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CipcQ8R0W1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Gm27275-201ENSMUST00000184318 272 ntBASIC17.04■□□□□ 0.32
CipcQ8R0W1 Gm37856-201ENSMUST00000191634 999 ntBASIC17.04■□□□□ 0.32
CipcQ8R0W1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CipcQ8R0W1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.03■□□□□ 0.32
CipcQ8R0W1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CipcQ8R0W1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CipcQ8R0W1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CipcQ8R0W1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CipcQ8R0W1 Gm44549-201ENSMUST00000208351 577 ntBASIC17.03■□□□□ 0.32
CipcQ8R0W1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CipcQ8R0W1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CipcQ8R0W1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CipcQ8R0W1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CipcQ8R0W1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CipcQ8R0W1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CipcQ8R0W1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CipcQ8R0W1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CipcQ8R0W1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CipcQ8R0W1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CipcQ8R0W1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CipcQ8R0W1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CipcQ8R0W1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.02■□□□□ 0.32
CipcQ8R0W1 Rarb-207ENSMUST00000225921 2756 ntBASIC17.02■□□□□ 0.31
CipcQ8R0W1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CipcQ8R0W1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CipcQ8R0W1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CipcQ8R0W1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms