Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Paf1Q8K2T8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Paf1Q8K2T8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Paf1Q8K2T8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.15■□□□□ 0.98
Paf1Q8K2T8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Paf1Q8K2T8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Paf1Q8K2T8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.15■□□□□ 0.98
Paf1Q8K2T8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Paf1Q8K2T8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Paf1Q8K2T8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Paf1Q8K2T8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Paf1Q8K2T8 Tgds-204ENSMUST00000228543 1594 ntBASIC21.14■□□□□ 0.98
Paf1Q8K2T8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Paf1Q8K2T8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Paf1Q8K2T8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Paf1Q8K2T8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Paf1Q8K2T8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Paf1Q8K2T8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Paf1Q8K2T8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Gm2559-201ENSMUST00000201323 363 ntBASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Paf1Q8K2T8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Flg-201ENSMUST00000050758 1488 ntBASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.13■□□□□ 0.97
Paf1Q8K2T8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Dio3-201ENSMUST00000097228 1449 ntBASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Gm38285-201ENSMUST00000192928 922 ntBASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Gm20049-201ENSMUST00000219950 730 ntBASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Paf1Q8K2T8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Zfp783-201ENSMUST00000095946 670 ntBASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.11■□□□□ 0.97
Paf1Q8K2T8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Paf1Q8K2T8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Paf1Q8K2T8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms