Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rl1Q8K0S5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rl1Q8K0S5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rl1Q8K0S5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rtn4rl1Q8K0S5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rl1Q8K0S5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rtn4rl1Q8K0S5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn4rl1Q8K0S5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.33■□□□□ 0.52
Rtn4rl1Q8K0S5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn4rl1Q8K0S5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 AA414768-201ENSMUST00000121924 1257 ntBASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Mir5130-201ENSMUST00000175160 84 ntBASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn4rl1Q8K0S5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Gm2274-201ENSMUST00000184539 609 ntBASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn4rl1Q8K0S5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4rl1Q8K0S5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4rl1Q8K0S5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4rl1Q8K0S5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rtn4rl1Q8K0S5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
Rtn4rl1Q8K0S5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4rl1Q8K0S5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4rl1Q8K0S5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4rl1Q8K0S5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn4rl1Q8K0S5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtn4rl1Q8K0S5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rtn4rl1Q8K0S5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
Rtn4rl1Q8K0S5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn4rl1Q8K0S5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.27■□□□□ 0.51
Rtn4rl1Q8K0S5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtn4rl1Q8K0S5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rl1Q8K0S5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.26■□□□□ 0.51
Rtn4rl1Q8K0S5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rl1Q8K0S5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rl1Q8K0S5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtn4rl1Q8K0S5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms