Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pdlim5Q8CI51 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim5Q8CI51 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pdlim5Q8CI51 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pdlim5Q8CI51 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Pdlim5Q8CI51 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim5Q8CI51 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim5Q8CI51 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pdlim5Q8CI51 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Pdlim5Q8CI51 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Tgds-204ENSMUST00000228543 1594 ntBASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 AV356131-201ENSMUST00000206201 750 ntBASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pdlim5Q8CI51 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pdlim5Q8CI51 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pdlim5Q8CI51 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim5Q8CI51 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim5Q8CI51 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim5Q8CI51 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim5Q8CI51 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim5Q8CI51 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pdlim5Q8CI51 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdlim5Q8CI51 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Gm18284-201ENSMUST00000172604 624 ntBASIC16.57■□□□□ 0.24
Pdlim5Q8CI51 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms