Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.13■□□□□ 0.17
ShfQ8CG80 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.13■□□□□ 0.17
ShfQ8CG80 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.13■□□□□ 0.17
ShfQ8CG80 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ShfQ8CG80 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ShfQ8CG80 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ShfQ8CG80 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ShfQ8CG80 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ShfQ8CG80 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ShfQ8CG80 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ShfQ8CG80 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ShfQ8CG80 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ShfQ8CG80 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.12■□□□□ 0.17
ShfQ8CG80 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ShfQ8CG80 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ShfQ8CG80 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.12■□□□□ 0.17
ShfQ8CG80 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ShfQ8CG80 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ShfQ8CG80 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ShfQ8CG80 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ShfQ8CG80 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ShfQ8CG80 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.11■□□□□ 0.17
ShfQ8CG80 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ShfQ8CG80 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ShfQ8CG80 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ShfQ8CG80 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.11■□□□□ 0.17
ShfQ8CG80 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ShfQ8CG80 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ShfQ8CG80 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ShfQ8CG80 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.1■□□□□ 0.17
ShfQ8CG80 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.1■□□□□ 0.17
ShfQ8CG80 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ShfQ8CG80 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
ShfQ8CG80 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ShfQ8CG80 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ShfQ8CG80 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
ShfQ8CG80 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.09■□□□□ 0.17
ShfQ8CG80 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ShfQ8CG80 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ShfQ8CG80 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ShfQ8CG80 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ShfQ8CG80 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ShfQ8CG80 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.08■□□□□ 0.17
ShfQ8CG80 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ShfQ8CG80 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
ShfQ8CG80 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ShfQ8CG80 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms