Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28aQ8CEI3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.08■□□□□ 0.65
Ccdc28aQ8CEI3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
Ccdc28aQ8CEI3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28aQ8CEI3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28aQ8CEI3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.08■□□□□ 0.65
Ccdc28aQ8CEI3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28aQ8CEI3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc28aQ8CEI3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc28aQ8CEI3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc28aQ8CEI3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Gm45417-201ENSMUST00000209533 758 ntBASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc28aQ8CEI3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Gm13146-201ENSMUST00000118508 780 ntBASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.05■□□□□ 0.64
Ccdc28aQ8CEI3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28aQ8CEI3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.04■□□□□ 0.64
Ccdc28aQ8CEI3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28aQ8CEI3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28aQ8CEI3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Ccdc28aQ8CEI3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28aQ8CEI3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
Ccdc28aQ8CEI3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28aQ8CEI3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc28aQ8CEI3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ccdc28aQ8CEI3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc28aQ8CEI3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms