Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb7Q8CDY9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Gm26571-201ENSMUST00000181399 666 ntBASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb7Q8CDY9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb7Q8CDY9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb7Q8CDY9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb7Q8CDY9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pcdhb7Q8CDY9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb7Q8CDY9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb7Q8CDY9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb7Q8CDY9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb7Q8CDY9 Gm10849-201ENSMUST00000100397 618 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms