Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Pabpn1Q8CCS6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Gm15794-201ENSMUST00000120182 631 ntBASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Gm37722-201ENSMUST00000193757 208 ntBASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 AC138767.1-201ENSMUST00000222661 415 ntBASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC28.23■■■□□ 2.11
Pabpn1Q8CCS6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pabpn1Q8CCS6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC28.22■■■□□ 2.11
Pabpn1Q8CCS6 Gm3272-201ENSMUST00000181181 1229 ntBASIC28.22■■■□□ 2.11
Pabpn1Q8CCS6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pabpn1Q8CCS6 Gm10566-201ENSMUST00000086739 996 ntBASIC28.22■■■□□ 2.11
Pabpn1Q8CCS6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pabpn1Q8CCS6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC28.21■■■□□ 2.11
Pabpn1Q8CCS6 Auts2-212ENSMUST00000178555 309 ntBASIC28.21■■■□□ 2.11
Pabpn1Q8CCS6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pabpn1Q8CCS6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC28.21■■■□□ 2.11
Pabpn1Q8CCS6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
Pabpn1Q8CCS6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pabpn1Q8CCS6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pabpn1Q8CCS6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pabpn1Q8CCS6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Pabpn1Q8CCS6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pabpn1Q8CCS6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pabpn1Q8CCS6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Pabpn1Q8CCS6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
Pabpn1Q8CCS6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC28.2■■■□□ 2.1
Pabpn1Q8CCS6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC28.2■■■□□ 2.1
Pabpn1Q8CCS6 AC161829.1-201ENSMUST00000220298 281 ntBASIC28.2■■■□□ 2.1
Pabpn1Q8CCS6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Pabpn1Q8CCS6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pabpn1Q8CCS6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC28.19■■■□□ 2.1
Pabpn1Q8CCS6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC28.19■■■□□ 2.1
Pabpn1Q8CCS6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Pabpn1Q8CCS6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pabpn1Q8CCS6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pabpn1Q8CCS6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC28.19■■■□□ 2.1
Pabpn1Q8CCS6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Pabpn1Q8CCS6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Pabpn1Q8CCS6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 AC153889.1-201ENSMUST00000219257 330 ntBASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Pabpn1Q8CCS6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pabpn1Q8CCS6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Pabpn1Q8CCS6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Pabpn1Q8CCS6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pabpn1Q8CCS6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pabpn1Q8CCS6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC28.17■■■□□ 2.1
Pabpn1Q8CCS6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Pabpn1Q8CCS6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pabpn1Q8CCS6 Gm24841-201ENSMUST00000158676 357 ntBASIC28.16■■■□□ 2.1
Pabpn1Q8CCS6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pabpn1Q8CCS6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pabpn1Q8CCS6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pabpn1Q8CCS6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pabpn1Q8CCS6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Pabpn1Q8CCS6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pabpn1Q8CCS6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 Gm5264-201ENSMUST00000190584 848 ntBASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pabpn1Q8CCS6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pabpn1Q8CCS6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pabpn1Q8CCS6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Pabpn1Q8CCS6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pabpn1Q8CCS6 Gm23935-201ENSMUST00000102303 57 ntBASIC28.14■■■□□ 2.1
Pabpn1Q8CCS6 Gm24270-201ENSMUST00000102326 57 ntBASIC28.14■■■□□ 2.1
Pabpn1Q8CCS6 Gm24245-201ENSMUST00000157318 57 ntBASIC28.14■■■□□ 2.1
Pabpn1Q8CCS6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Pabpn1Q8CCS6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms