Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SynpoQ8CC35 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SynpoQ8CC35 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.45■□□□□ 0.38
SynpoQ8CC35 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SynpoQ8CC35 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SynpoQ8CC35 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SynpoQ8CC35 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SynpoQ8CC35 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SynpoQ8CC35 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.45■□□□□ 0.38
SynpoQ8CC35 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.45■□□□□ 0.38
SynpoQ8CC35 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SynpoQ8CC35 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SynpoQ8CC35 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SynpoQ8CC35 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Grk6-206ENSMUST00000224995 2971 ntBASIC17.44■□□□□ 0.38
SynpoQ8CC35 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.44■□□□□ 0.38
SynpoQ8CC35 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Gm26524-201ENSMUST00000192339 390 ntBASIC17.44■□□□□ 0.38
SynpoQ8CC35 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Rab3c-203ENSMUST00000224180 967 ntBASIC17.44■□□□□ 0.38
SynpoQ8CC35 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SynpoQ8CC35 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SynpoQ8CC35 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.43■□□□□ 0.38
SynpoQ8CC35 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SynpoQ8CC35 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.43■□□□□ 0.38
SynpoQ8CC35 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SynpoQ8CC35 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SynpoQ8CC35 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.43■□□□□ 0.38
SynpoQ8CC35 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SynpoQ8CC35 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.43■□□□□ 0.38
SynpoQ8CC35 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SynpoQ8CC35 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SynpoQ8CC35 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SynpoQ8CC35 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.42■□□□□ 0.38
SynpoQ8CC35 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.42■□□□□ 0.38
SynpoQ8CC35 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SynpoQ8CC35 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SynpoQ8CC35 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.41■□□□□ 0.38
SynpoQ8CC35 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SynpoQ8CC35 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.4■□□□□ 0.38
SynpoQ8CC35 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Gm13168-201ENSMUST00000121771 632 ntBASIC17.4■□□□□ 0.38
SynpoQ8CC35 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SynpoQ8CC35 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms