Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Alx1Q8C8B0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alx1Q8C8B0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Alx1Q8C8B0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Alx1Q8C8B0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Alx1Q8C8B0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Alx1Q8C8B0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Alx1Q8C8B0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.14■□□□□ 0.97
Alx1Q8C8B0 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.14■□□□□ 0.97
Alx1Q8C8B0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Alx1Q8C8B0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.14■□□□□ 0.97
Alx1Q8C8B0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.14■□□□□ 0.97
Alx1Q8C8B0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Alx1Q8C8B0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Alx1Q8C8B0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Alx1Q8C8B0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Alx1Q8C8B0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Alx1Q8C8B0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Gm15378-201ENSMUST00000121894 207 ntBASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Gm18025-201ENSMUST00000221733 862 ntBASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Alx1Q8C8B0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Alx1Q8C8B0 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.11■□□□□ 0.97
Alx1Q8C8B0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Alx1Q8C8B0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Alx1Q8C8B0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.11■□□□□ 0.97
Alx1Q8C8B0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.11■□□□□ 0.97
Alx1Q8C8B0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Alx1Q8C8B0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Alx1Q8C8B0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Alx1Q8C8B0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Alx1Q8C8B0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alx1Q8C8B0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Alx1Q8C8B0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Alx1Q8C8B0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Alx1Q8C8B0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Alx1Q8C8B0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alx1Q8C8B0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alx1Q8C8B0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Alx1Q8C8B0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Alx1Q8C8B0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Alx1Q8C8B0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Alx1Q8C8B0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.09■□□□□ 0.97
Alx1Q8C8B0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.09■□□□□ 0.97
Alx1Q8C8B0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Alx1Q8C8B0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.09■□□□□ 0.97
Alx1Q8C8B0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Alx1Q8C8B0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Alx1Q8C8B0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Alx1Q8C8B0 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.08■□□□□ 0.97
Alx1Q8C8B0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.08■□□□□ 0.97
Alx1Q8C8B0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Alx1Q8C8B0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Alx1Q8C8B0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Alx1Q8C8B0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Alx1Q8C8B0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.08■□□□□ 0.97
Alx1Q8C8B0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Alx1Q8C8B0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Alx1Q8C8B0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Alx1Q8C8B0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.08■□□□□ 0.96
Alx1Q8C8B0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Alx1Q8C8B0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms