Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap54Q8C6S9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cfap54Q8C6S9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cfap54Q8C6S9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cfap54Q8C6S9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Gm7153-201ENSMUST00000117092 455 ntBASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cfap54Q8C6S9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfap54Q8C6S9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfap54Q8C6S9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms