Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Gm11249-201ENSMUST00000117071 859 ntBASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Gm37856-201ENSMUST00000191634 999 ntBASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Gm38285-201ENSMUST00000192928 922 ntBASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc60Q8C4J0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc60Q8C4J0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc60Q8C4J0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc60Q8C4J0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc60Q8C4J0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc60Q8C4J0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Ccdc60Q8C4J0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Ccdc60Q8C4J0 Gm10653-202ENSMUST00000139570 835 ntBASIC23.03■■□□□ 1.28
Ccdc60Q8C4J0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc60Q8C4J0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc60Q8C4J0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc60Q8C4J0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc60Q8C4J0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
Ccdc60Q8C4J0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc60Q8C4J0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC23.02■■□□□ 1.28
Ccdc60Q8C4J0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc60Q8C4J0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc60Q8C4J0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 Mtag2-201ENSMUST00000058665 714 ntBASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
Ccdc60Q8C4J0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ccdc60Q8C4J0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ccdc60Q8C4J0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Trmt13-210ENSMUST00000198454 880 ntBASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ccdc60Q8C4J0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Gm27011-201ENSMUST00000182352 972 ntBASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Ccdc60Q8C4J0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc60Q8C4J0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc60Q8C4J0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms