Protein–RNA interactions for Protein: Q8C4H2

Samd3, Sterile alpha motif domain-containing protein 3, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd3Q8C4H2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Mir6982-201ENSMUST00000184354 68 ntBASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Samd3Q8C4H2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Samd3Q8C4H2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Samd3Q8C4H2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Samd3Q8C4H2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Samd3Q8C4H2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Samd3Q8C4H2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 Gm12382-201ENSMUST00000122005 922 ntBASIC18.61■□□□□ 0.57
Samd3Q8C4H2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Samd3Q8C4H2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samd3Q8C4H2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samd3Q8C4H2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samd3Q8C4H2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samd3Q8C4H2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Samd3Q8C4H2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Samd3Q8C4H2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samd3Q8C4H2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.6■□□□□ 0.57
Samd3Q8C4H2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samd3Q8C4H2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Samd3Q8C4H2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms