Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Eri3Q8C460 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Eri3Q8C460 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Eri3Q8C460 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.17■□□□□ 0.34
Eri3Q8C460 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 Gm2399-201ENSMUST00000104944 225 ntBASIC17.17■□□□□ 0.34
Eri3Q8C460 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.17■□□□□ 0.34
Eri3Q8C460 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Eri3Q8C460 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Eri3Q8C460 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Eri3Q8C460 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Eri3Q8C460 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.16■□□□□ 0.34
Eri3Q8C460 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Eri3Q8C460 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Eri3Q8C460 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.16■□□□□ 0.34
Eri3Q8C460 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Eri3Q8C460 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.16■□□□□ 0.34
Eri3Q8C460 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Eri3Q8C460 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Eri3Q8C460 Gm4968-201ENSMUST00000071458 858 ntBASIC17.16■□□□□ 0.34
Eri3Q8C460 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Eri3Q8C460 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Eri3Q8C460 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Eri3Q8C460 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Eri3Q8C460 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Eri3Q8C460 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Eri3Q8C460 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Eri3Q8C460 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Eri3Q8C460 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.15■□□□□ 0.34
Eri3Q8C460 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.15■□□□□ 0.34
Eri3Q8C460 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.15■□□□□ 0.34
Eri3Q8C460 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.15■□□□□ 0.34
Eri3Q8C460 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.15■□□□□ 0.34
Eri3Q8C460 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Eri3Q8C460 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Eri3Q8C460 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Eri3Q8C460 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Eri3Q8C460 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Eri3Q8C460 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Eri3Q8C460 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Eri3Q8C460 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Eri3Q8C460 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Eri3Q8C460 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Eri3Q8C460 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.14■□□□□ 0.33
Eri3Q8C460 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.14■□□□□ 0.33
Eri3Q8C460 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Eri3Q8C460 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Eri3Q8C460 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Eri3Q8C460 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Eri3Q8C460 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.13■□□□□ 0.33
Eri3Q8C460 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.13■□□□□ 0.33
Eri3Q8C460 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.13■□□□□ 0.33
Eri3Q8C460 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Eri3Q8C460 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Eri3Q8C460 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Eri3Q8C460 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.13■□□□□ 0.33
Eri3Q8C460 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Eri3Q8C460 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Eri3Q8C460 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Eri3Q8C460 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Eri3Q8C460 Fst-202ENSMUST00000223640 2612 ntBASIC17.13■□□□□ 0.33
Eri3Q8C460 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.13■□□□□ 0.33
Eri3Q8C460 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Eri3Q8C460 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Eri3Q8C460 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Eri3Q8C460 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Eri3Q8C460 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms