Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Gm23634-201ENSMUST00000175071 91 ntBASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 AC159205.6-201ENSMUST00000224935 887 ntBASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ptcd1Q8C2E4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Rncr4-201ENSMUST00000194541 2234 ntBASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptcd1Q8C2E4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptcd1Q8C2E4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptcd1Q8C2E4 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ptcd1Q8C2E4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptcd1Q8C2E4 Gm37292-201ENSMUST00000192062 758 ntBASIC22.26■■□□□ 1.15
Ptcd1Q8C2E4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptcd1Q8C2E4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptcd1Q8C2E4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptcd1Q8C2E4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptcd1Q8C2E4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Ptcd1Q8C2E4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Golph3-205ENSMUST00000228671 2842 ntBASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptcd1Q8C2E4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ptcd1Q8C2E4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptcd1Q8C2E4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptcd1Q8C2E4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptcd1Q8C2E4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptcd1Q8C2E4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptcd1Q8C2E4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptcd1Q8C2E4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ptcd1Q8C2E4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptcd1Q8C2E4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC22.22■■□□□ 1.15
Ptcd1Q8C2E4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Ptcd1Q8C2E4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptcd1Q8C2E4 Gm10013-201ENSMUST00000106074 672 ntBASIC22.21■■□□□ 1.15
Ptcd1Q8C2E4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ptcd1Q8C2E4 Gm18959-201ENSMUST00000208954 655 ntBASIC22.21■■□□□ 1.15
Ptcd1Q8C2E4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptcd1Q8C2E4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ptcd1Q8C2E4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptcd1Q8C2E4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.15
Ptcd1Q8C2E4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Ptcd1Q8C2E4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ptcd1Q8C2E4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms