Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc44a2Q8BY89 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc44a2Q8BY89 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc44a2Q8BY89 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Gm27801-201ENSMUST00000184174 223 ntBASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Slc44a2Q8BY89 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc44a2Q8BY89 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc44a2Q8BY89 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.53■□□□□ 0.4
Slc44a2Q8BY89 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc44a2Q8BY89 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.52■□□□□ 0.4
Slc44a2Q8BY89 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc44a2Q8BY89 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc44a2Q8BY89 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc44a2Q8BY89 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc44a2Q8BY89 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Slc44a2Q8BY89 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc44a2Q8BY89 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slc44a2Q8BY89 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Slc44a2Q8BY89 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc44a2Q8BY89 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms