Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC25.59■■□□□ 1.69
Usp47Q8BY87 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Usp47Q8BY87 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Usp47Q8BY87 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Usp47Q8BY87 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Usp47Q8BY87 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Usp47Q8BY87 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Usp47Q8BY87 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Usp47Q8BY87 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Usp47Q8BY87 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Usp47Q8BY87 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Usp47Q8BY87 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Usp47Q8BY87 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
Usp47Q8BY87 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Usp47Q8BY87 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Usp47Q8BY87 Gm12382-201ENSMUST00000122005 922 ntBASIC25.57■■□□□ 1.68
Usp47Q8BY87 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Usp47Q8BY87 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC25.57■■□□□ 1.68
Usp47Q8BY87 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC25.57■■□□□ 1.68
Usp47Q8BY87 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Gm9484-201ENSMUST00000195892 1159 ntBASIC25.56■■□□□ 1.68
Usp47Q8BY87 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Fst-202ENSMUST00000223640 2612 ntBASIC25.56■■□□□ 1.68
Usp47Q8BY87 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Mir5122-201ENSMUST00000175004 89 ntBASIC25.56■■□□□ 1.68
Usp47Q8BY87 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC25.56■■□□□ 1.68
Usp47Q8BY87 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp47Q8BY87 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Gm37820-201ENSMUST00000194021 2147 ntBASIC25.55■■□□□ 1.68
Usp47Q8BY87 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Usp47Q8BY87 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp47Q8BY87 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Usp47Q8BY87 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp47Q8BY87 AC123834.2-201ENSMUST00000224038 2340 ntBASIC25.53■■□□□ 1.68
Usp47Q8BY87 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Usp47Q8BY87 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Usp47Q8BY87 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Usp47Q8BY87 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp47Q8BY87 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Usp47Q8BY87 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp47Q8BY87 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp47Q8BY87 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Usp47Q8BY87 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
Usp47Q8BY87 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC25.51■■□□□ 1.67
Usp47Q8BY87 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Usp47Q8BY87 Gm37374-201ENSMUST00000194954 1829 ntBASIC25.51■■□□□ 1.67
Usp47Q8BY87 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Usp47Q8BY87 AL672049.1-201ENSMUST00000197943 91 ntBASIC25.51■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms