Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cpsf4Q8BQZ5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cpsf4Q8BQZ5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4Q8BQZ5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.52■□□□□ 0.4
Cpsf4Q8BQZ5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4Q8BQZ5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Cpsf4Q8BQZ5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4Q8BQZ5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.52■□□□□ 0.4
Cpsf4Q8BQZ5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4Q8BQZ5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4Q8BQZ5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cpsf4Q8BQZ5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpsf4Q8BQZ5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cpsf4Q8BQZ5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.52■□□□□ 0.39
Cpsf4Q8BQZ5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Cpsf4Q8BQZ5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cpsf4Q8BQZ5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cpsf4Q8BQZ5 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cpsf4Q8BQZ5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.48■□□□□ 0.39
Cpsf4Q8BQZ5 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms