Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Gm7284-201ENSMUST00000131667 944 ntBASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Gm2274-201ENSMUST00000184539 609 ntBASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Col16a1Q8BLX7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Gm14859-201ENSMUST00000117752 357 ntBASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Gm17661-201ENSMUST00000170317 270 ntBASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Gm22697-201ENSMUST00000175194 63 ntBASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Col16a1Q8BLX7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col16a1Q8BLX7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.89■■□□□ 1.42
Col16a1Q8BLX7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Col16a1Q8BLX7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col16a1Q8BLX7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col16a1Q8BLX7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col16a1Q8BLX7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col16a1Q8BLX7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col16a1Q8BLX7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Col16a1Q8BLX7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC23.89■■□□□ 1.41
Col16a1Q8BLX7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Col16a1Q8BLX7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Col16a1Q8BLX7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Col16a1Q8BLX7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Col16a1Q8BLX7 Gm9885-202ENSMUST00000186234 2209 ntBASIC23.89■■□□□ 1.41
Col16a1Q8BLX7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Col16a1Q8BLX7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Col16a1Q8BLX7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC23.87■■□□□ 1.41
Col16a1Q8BLX7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col16a1Q8BLX7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Col16a1Q8BLX7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Col16a1Q8BLX7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 BC021767-201ENSMUST00000126387 1716 ntBASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
Col16a1Q8BLX7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Col16a1Q8BLX7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Gm13401-201ENSMUST00000117074 291 ntBASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Col16a1Q8BLX7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col16a1Q8BLX7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col16a1Q8BLX7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Col16a1Q8BLX7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Col16a1Q8BLX7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Col16a1Q8BLX7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col16a1Q8BLX7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Col16a1Q8BLX7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Col16a1Q8BLX7 Gm4974-201ENSMUST00000209974 875 ntBASIC23.82■■□□□ 1.4
Col16a1Q8BLX7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Col16a1Q8BLX7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms