Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cdhr3Q8BL00 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cdhr3Q8BL00 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdhr3Q8BL00 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdhr3Q8BL00 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cdhr3Q8BL00 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Cdhr3Q8BL00 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cdhr3Q8BL00 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cdhr3Q8BL00 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cdhr3Q8BL00 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cdhr3Q8BL00 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdhr3Q8BL00 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms