Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smg1Q8BKX6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Gm5587-201ENSMUST00000206270 674 ntBASIC15.35■□□□□ 0.05
Smg1Q8BKX6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Smg1Q8BKX6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Smg1Q8BKX6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Smg1Q8BKX6 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.33■□□□□ 0.05
Smg1Q8BKX6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Smg1Q8BKX6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smg1Q8BKX6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.33■□□□□ 0.05
Smg1Q8BKX6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smg1Q8BKX6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smg1Q8BKX6 Iqck-206ENSMUST00000208658 2891 ntBASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Gm18958-201ENSMUST00000174258 762 ntBASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smg1Q8BKX6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Gm29518-201ENSMUST00000190858 372 ntBASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smg1Q8BKX6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.31■□□□□ 0.04
Smg1Q8BKX6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms