Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clrn3Q8BHH8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clrn3Q8BHH8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Clrn3Q8BHH8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Clrn3Q8BHH8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.3
Clrn3Q8BHH8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Gm22325-201ENSMUST00000158904 308 ntBASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Gm6211-202ENSMUST00000167849 925 ntBASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Gm37179-201ENSMUST00000194862 823 ntBASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Clrn3Q8BHH8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Mir5133-201ENSMUST00000174955 77 ntBASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Clrn3Q8BHH8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Clrn3Q8BHH8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms