Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim50Q810I2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim50Q810I2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim50Q810I2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.6■□□□□ 0.41
Trim50Q810I2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.6■□□□□ 0.41
Trim50Q810I2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trim50Q810I2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim50Q810I2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trim50Q810I2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim50Q810I2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim50Q810I2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim50Q810I2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim50Q810I2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim50Q810I2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim50Q810I2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Gm29257-201ENSMUST00000186115 639 ntBASIC17.59■□□□□ 0.41
Trim50Q810I2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim50Q810I2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Gm10602-201ENSMUST00000098239 609 ntBASIC17.59■□□□□ 0.41
Trim50Q810I2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trim50Q810I2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim50Q810I2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trim50Q810I2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim50Q810I2 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.58■□□□□ 0.4
Trim50Q810I2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim50Q810I2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
Trim50Q810I2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim50Q810I2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim50Q810I2 Rab3c-203ENSMUST00000224180 967 ntBASIC17.58■□□□□ 0.4
Trim50Q810I2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim50Q810I2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim50Q810I2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trim50Q810I2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim50Q810I2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim50Q810I2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.57■□□□□ 0.4
Trim50Q810I2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim50Q810I2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.57■□□□□ 0.4
Trim50Q810I2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trim50Q810I2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim50Q810I2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Trim50Q810I2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Trim50Q810I2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.56■□□□□ 0.4
Trim50Q810I2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim50Q810I2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim50Q810I2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim50Q810I2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim50Q810I2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim50Q810I2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim50Q810I2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.56■□□□□ 0.4
Trim50Q810I2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms