Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Gm7291-201ENSMUST00000199147 382 ntBASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc116Q80X53 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc116Q80X53 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc116Q80X53 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc116Q80X53 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc116Q80X53 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc116Q80X53 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Gm13148-201ENSMUST00000118892 745 ntBASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Gm6211-202ENSMUST00000167849 925 ntBASIC17.62■□□□□ 0.41
Ccdc116Q80X53 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc116Q80X53 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc116Q80X53 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc116Q80X53 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms