Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Gm44549-201ENSMUST00000208351 577 ntBASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38bQ80SY5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38bQ80SY5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
Prpf38bQ80SY5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38bQ80SY5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Prpf38bQ80SY5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prpf38bQ80SY5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Prpf38bQ80SY5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prpf38bQ80SY5 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Prpf38bQ80SY5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prpf38bQ80SY5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms