Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pif1Q80SX8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Gm6433-201ENSMUST00000118634 875 ntBASIC16.62■□□□□ 0.25
Pif1Q80SX8 Gm43799-201ENSMUST00000201845 579 ntBASIC16.62■□□□□ 0.25
Pif1Q80SX8 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.62■□□□□ 0.25
Pif1Q80SX8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pif1Q80SX8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pif1Q80SX8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.61■□□□□ 0.25
Pif1Q80SX8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pif1Q80SX8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Gm15375-201ENSMUST00000119510 849 ntBASIC16.6■□□□□ 0.25
Pif1Q80SX8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Gm18025-201ENSMUST00000221733 862 ntBASIC16.6■□□□□ 0.25
Pif1Q80SX8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pif1Q80SX8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Pif1Q80SX8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Gm42545-201ENSMUST00000202755 922 ntBASIC16.59■□□□□ 0.25
Pif1Q80SX8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pif1Q80SX8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pif1Q80SX8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pif1Q80SX8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pif1Q80SX8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pif1Q80SX8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pif1Q80SX8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pif1Q80SX8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pif1Q80SX8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.58■□□□□ 0.24
Pif1Q80SX8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.58■□□□□ 0.24
Pif1Q80SX8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pif1Q80SX8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.57■□□□□ 0.24
Pif1Q80SX8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pif1Q80SX8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms