Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Gm27801-201ENSMUST00000184174 223 ntBASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdp1Q7TSG2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdp1Q7TSG2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdp1Q7TSG2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdp1Q7TSG2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdp1Q7TSG2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdp1Q7TSG2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdp1Q7TSG2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ctdp1Q7TSG2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ctdp1Q7TSG2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.67■□□□□ 0.74
Ctdp1Q7TSG2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.66■□□□□ 0.74
Ctdp1Q7TSG2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctdp1Q7TSG2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ctdp1Q7TSG2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ctdp1Q7TSG2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ctdp1Q7TSG2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ctdp1Q7TSG2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.64■□□□□ 0.74
Ctdp1Q7TSG2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ctdp1Q7TSG2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ctdp1Q7TSG2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ctdp1Q7TSG2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctdp1Q7TSG2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctdp1Q7TSG2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms