Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Scn4bQ7M729 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.59■□□□□ 0.41
Scn4bQ7M729 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Gm6211-202ENSMUST00000167849 925 ntBASIC17.59■□□□□ 0.41
Scn4bQ7M729 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.59■□□□□ 0.41
Scn4bQ7M729 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.59■□□□□ 0.41
Scn4bQ7M729 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn4bQ7M729 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Scn4bQ7M729 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.58■□□□□ 0.41
Scn4bQ7M729 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scn4bQ7M729 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn4bQ7M729 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.58■□□□□ 0.41
Scn4bQ7M729 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Scn4bQ7M729 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Scn4bQ7M729 Gm12933-201ENSMUST00000120203 872 ntBASIC17.58■□□□□ 0.4
Scn4bQ7M729 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn4bQ7M729 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn4bQ7M729 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn4bQ7M729 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn4bQ7M729 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn4bQ7M729 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn4bQ7M729 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scn4bQ7M729 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Scn4bQ7M729 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.57■□□□□ 0.4
Scn4bQ7M729 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Scn4bQ7M729 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scn4bQ7M729 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn4bQ7M729 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scn4bQ7M729 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Mir5133-201ENSMUST00000174955 77 ntBASIC17.55■□□□□ 0.4
Scn4bQ7M729 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.55■□□□□ 0.4
Scn4bQ7M729 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Scn4bQ7M729 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms