Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Tgds-204ENSMUST00000228543 1594 ntBASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Npc1l1Q6T3U4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Gm10138-203ENSMUST00000206952 366 ntBASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Npc1l1Q6T3U4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Npc1l1Q6T3U4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Npc1l1Q6T3U4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Npc1l1Q6T3U4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Npc1l1Q6T3U4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Npc1l1Q6T3U4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Npc1l1Q6T3U4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Npc1l1Q6T3U4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Npc1l1Q6T3U4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Npc1l1Q6T3U4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Npc1l1Q6T3U4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Npc1l1Q6T3U4 Mir5122-201ENSMUST00000175004 89 ntBASIC21.66■■□□□ 1.06
Npc1l1Q6T3U4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.66■■□□□ 1.06
Npc1l1Q6T3U4 Gm9987-201ENSMUST00000069768 567 ntBASIC21.66■■□□□ 1.06
Npc1l1Q6T3U4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Npc1l1Q6T3U4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Npc1l1Q6T3U4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Npc1l1Q6T3U4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.65■■□□□ 1.06
Npc1l1Q6T3U4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Npc1l1Q6T3U4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Npc1l1Q6T3U4 Gm11643-201ENSMUST00000119578 864 ntBASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.64■■□□□ 1.05
Npc1l1Q6T3U4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms