Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ddx58Q6Q899 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ddx58Q6Q899 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Gm16042-201ENSMUST00000204813 1247 ntBASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ddx58Q6Q899 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx58Q6Q899 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx58Q6Q899 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx58Q6Q899 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC22.35■■□□□ 1.17
Ddx58Q6Q899 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ddx58Q6Q899 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ddx58Q6Q899 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx58Q6Q899 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Gm15565-201ENSMUST00000118890 427 ntBASIC22.34■■□□□ 1.17
Ddx58Q6Q899 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx58Q6Q899 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx58Q6Q899 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx58Q6Q899 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.33■■□□□ 1.17
Ddx58Q6Q899 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.33■■□□□ 1.17
Ddx58Q6Q899 Gm21814-202ENSMUST00000203277 873 ntBASIC22.33■■□□□ 1.17
Ddx58Q6Q899 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.33■■□□□ 1.17
Ddx58Q6Q899 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx58Q6Q899 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx58Q6Q899 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx58Q6Q899 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx58Q6Q899 AC108858.1-201ENSMUST00000228461 1498 ntBASIC22.33■■□□□ 1.16
Ddx58Q6Q899 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx58Q6Q899 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx58Q6Q899 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Ddx58Q6Q899 Tgds-204ENSMUST00000228543 1594 ntBASIC22.33■■□□□ 1.16
Ddx58Q6Q899 Gm43213-201ENSMUST00000151866 1790 ntBASIC22.33■■□□□ 1.16
Ddx58Q6Q899 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx58Q6Q899 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.31■■□□□ 1.16
Ddx58Q6Q899 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx58Q6Q899 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx58Q6Q899 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.31■■□□□ 1.16
Ddx58Q6Q899 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx58Q6Q899 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx58Q6Q899 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx58Q6Q899 Gm5417-201ENSMUST00000079706 384 ntBASIC22.31■■□□□ 1.16
Ddx58Q6Q899 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx58Q6Q899 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Gm11643-201ENSMUST00000119578 864 ntBASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Gm20472-201ENSMUST00000174403 1240 ntBASIC22.3■■□□□ 1.16
Ddx58Q6Q899 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms