Protein–RNA interactions for Protein: Q6Q473

Clca4a, Calcium-activated chloride channel regulator 4A, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4aQ6Q473 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca4aQ6Q473 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca4aQ6Q473 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca4aQ6Q473 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca4aQ6Q473 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca4aQ6Q473 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clca4aQ6Q473 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clca4aQ6Q473 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clca4aQ6Q473 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clca4aQ6Q473 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clca4aQ6Q473 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Clca4aQ6Q473 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.52■□□□□ 0.88
Clca4aQ6Q473 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.52■□□□□ 0.88
Clca4aQ6Q473 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Clca4aQ6Q473 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Clca4aQ6Q473 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Clca4aQ6Q473 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Clca4aQ6Q473 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Gm715-201ENSMUST00000117865 831 ntBASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.5■□□□□ 0.87
Clca4aQ6Q473 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Clca4aQ6Q473 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Clca4aQ6Q473 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Clca4aQ6Q473 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.49■□□□□ 0.87
Clca4aQ6Q473 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Fst-202ENSMUST00000223640 2612 ntBASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Clca4aQ6Q473 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Clca4aQ6Q473 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clca4aQ6Q473 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms