Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CtifQ6PEE2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Gm13216-201ENSMUST00000117145 591 ntBASIC19.25■□□□□ 0.67
CtifQ6PEE2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.25■□□□□ 0.67
CtifQ6PEE2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.25■□□□□ 0.67
CtifQ6PEE2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.24■□□□□ 0.67
CtifQ6PEE2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Gm13238-201ENSMUST00000117655 780 ntBASIC19.24■□□□□ 0.67
CtifQ6PEE2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CtifQ6PEE2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.23■□□□□ 0.67
CtifQ6PEE2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.23■□□□□ 0.67
CtifQ6PEE2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CtifQ6PEE2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CtifQ6PEE2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.22■□□□□ 0.67
CtifQ6PEE2 Gm43566-201ENSMUST00000196851 808 ntBASIC19.22■□□□□ 0.67
CtifQ6PEE2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CtifQ6PEE2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CtifQ6PEE2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CtifQ6PEE2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CtifQ6PEE2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CtifQ6PEE2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CtifQ6PEE2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.2■□□□□ 0.66
CtifQ6PEE2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CtifQ6PEE2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms