Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Snrnp40Q6PE01 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Gm38027-201ENSMUST00000192315 235 ntBASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Snrnp40Q6PE01 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Gm14859-201ENSMUST00000117752 357 ntBASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Snrnp40Q6PE01 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Snrnp40Q6PE01 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Gm22697-201ENSMUST00000175194 63 ntBASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Gm18101-201ENSMUST00000215769 548 ntBASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Snrnp40Q6PE01 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Gm9103-201ENSMUST00000119371 405 ntBASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Snrnp40Q6PE01 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Snrnp40Q6PE01 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms