Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.08■□□□□ 0.96
Smarcc2Q6PDG5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Gm27011-201ENSMUST00000182352 972 ntBASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smarcc2Q6PDG5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.06■□□□□ 0.96
Smarcc2Q6PDG5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc2Q6PDG5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc2Q6PDG5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc2Q6PDG5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.05■□□□□ 0.96
Smarcc2Q6PDG5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarcc2Q6PDG5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.05■□□□□ 0.96
Smarcc2Q6PDG5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarcc2Q6PDG5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarcc2Q6PDG5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Smarcc2Q6PDG5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms