Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Herc4Q6PAV2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.95■□□□□ 0.79
Herc4Q6PAV2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Grk6-206ENSMUST00000224995 2971 ntBASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Herc4Q6PAV2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herc4Q6PAV2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Herc4Q6PAV2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Herc4Q6PAV2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Gm2399-201ENSMUST00000104944 225 ntBASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herc4Q6PAV2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herc4Q6PAV2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms