Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp140Q6NSQ5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sp140Q6NSQ5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp140Q6NSQ5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp140Q6NSQ5 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sp140Q6NSQ5 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sp140Q6NSQ5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sp140Q6NSQ5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Gm6211-202ENSMUST00000167849 925 ntBASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Gm27405-201ENSMUST00000184201 112 ntBASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sp140Q6NSQ5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sp140Q6NSQ5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.27■□□□□ 0.52
Sp140Q6NSQ5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sp140Q6NSQ5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sp140Q6NSQ5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sp140Q6NSQ5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.27■□□□□ 0.52
Sp140Q6NSQ5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sp140Q6NSQ5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sp140Q6NSQ5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Sp140Q6NSQ5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sp140Q6NSQ5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sp140Q6NSQ5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sp140Q6NSQ5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Sp140Q6NSQ5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Gm13148-201ENSMUST00000118892 745 ntBASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sp140Q6NSQ5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sp140Q6NSQ5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms