Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg2Q6NS82 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.43■□□□□ 0.7
Retreg2Q6NS82 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg2Q6NS82 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Retreg2Q6NS82 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.43■□□□□ 0.7
Retreg2Q6NS82 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Gm37856-201ENSMUST00000191634 999 ntBASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Gm26524-201ENSMUST00000192339 390 ntBASIC19.42■□□□□ 0.7
Retreg2Q6NS82 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg2Q6NS82 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg2Q6NS82 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Gm13168-201ENSMUST00000121771 632 ntBASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Retreg2Q6NS82 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retreg2Q6NS82 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retreg2Q6NS82 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retreg2Q6NS82 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retreg2Q6NS82 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retreg2Q6NS82 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retreg2Q6NS82 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Gm27275-201ENSMUST00000184318 272 ntBASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Trmt13-210ENSMUST00000198454 880 ntBASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Rab3c-203ENSMUST00000224180 967 ntBASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retreg2Q6NS82 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retreg2Q6NS82 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms