Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gm5812-201ENSMUST00000061073 957 ntBASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt42Q6IFX2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.55■□□□□ 0.56
Krt42Q6IFX2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Gm15546-201ENSMUST00000122095 826 ntBASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Krt42Q6IFX2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt42Q6IFX2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Krt42Q6IFX2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt42Q6IFX2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt42Q6IFX2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.52■□□□□ 0.56
Krt42Q6IFX2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt42Q6IFX2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt42Q6IFX2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Krt42Q6IFX2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Krt42Q6IFX2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Krt42Q6IFX2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Krt42Q6IFX2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Krt42Q6IFX2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Krt42Q6IFX2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krt42Q6IFX2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Krt42Q6IFX2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krt42Q6IFX2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Krt42Q6IFX2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Krt42Q6IFX2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krt42Q6IFX2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt42Q6IFX2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms