Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Col11a2Q64739 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.09■■□□□ 1.13
Col11a2Q64739 Gm44771-201ENSMUST00000206975 626 ntBASIC22.09■■□□□ 1.13
Col11a2Q64739 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col11a2Q64739 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC22.08■■□□□ 1.13
Col11a2Q64739 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Col11a2Q64739 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col11a2Q64739 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Col11a2Q64739 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col11a2Q64739 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col11a2Q64739 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a2Q64739 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a2Q64739 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a2Q64739 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a2Q64739 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a2Q64739 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a2Q64739 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.08■■□□□ 1.12
Col11a2Q64739 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Col11a2Q64739 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC22.08■■□□□ 1.12
Col11a2Q64739 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col11a2Q64739 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a2Q64739 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a2Q64739 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a2Q64739 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Col11a2Q64739 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
Col11a2Q64739 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a2Q64739 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col11a2Q64739 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a2Q64739 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a2Q64739 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a2Q64739 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a2Q64739 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a2Q64739 Gm7638-201ENSMUST00000121348 967 ntBASIC22.06■■□□□ 1.12
Col11a2Q64739 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Col11a2Q64739 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a2Q64739 Gm27357-201ENSMUST00000183754 135 ntBASIC22.06■■□□□ 1.12
Col11a2Q64739 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC22.06■■□□□ 1.12
Col11a2Q64739 Gm21559-201ENSMUST00000220638 855 ntBASIC22.06■■□□□ 1.12
Col11a2Q64739 Gm8587-201ENSMUST00000076538 843 ntBASIC22.06■■□□□ 1.12
Col11a2Q64739 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a2Q64739 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.06■■□□□ 1.12
Col11a2Q64739 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a2Q64739 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC22.06■■□□□ 1.12
Col11a2Q64739 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.06■■□□□ 1.12
Col11a2Q64739 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Col11a2Q64739 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col11a2Q64739 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.05■■□□□ 1.12
Col11a2Q64739 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a2Q64739 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a2Q64739 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a2Q64739 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a2Q64739 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a2Q64739 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col11a2Q64739 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC22.04■■□□□ 1.12
Col11a2Q64739 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col11a2Q64739 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col11a2Q64739 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC22.04■■□□□ 1.12
Col11a2Q64739 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC22.04■■□□□ 1.12
Col11a2Q64739 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Col11a2Q64739 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col11a2Q64739 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a2Q64739 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC22.03■■□□□ 1.12
Col11a2Q64739 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a2Q64739 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a2Q64739 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a2Q64739 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a2Q64739 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a2Q64739 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col11a2Q64739 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col11a2Q64739 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col11a2Q64739 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col11a2Q64739 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Col11a2Q64739 Gm13474-201ENSMUST00000122466 815 ntBASIC22.02■■□□□ 1.12
Col11a2Q64739 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Col11a2Q64739 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Col11a2Q64739 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Col11a2Q64739 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col11a2Q64739 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Col11a2Q64739 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Col11a2Q64739 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Col11a2Q64739 Spsb2-203ENSMUST00000112473 1322 ntBASIC22.01■■□□□ 1.11
Col11a2Q64739 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col11a2Q64739 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Col11a2Q64739 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Col11a2Q64739 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col11a2Q64739 Gm24841-201ENSMUST00000158676 357 ntBASIC22.01■■□□□ 1.11
Col11a2Q64739 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col11a2Q64739 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Col11a2Q64739 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Col11a2Q64739 Gm11950-201ENSMUST00000121615 838 ntBASIC22■■□□□ 1.11
Col11a2Q64739 Gm9731-201ENSMUST00000209480 747 ntBASIC22■■□□□ 1.11
Col11a2Q64739 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col11a2Q64739 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Col11a2Q64739 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Col11a2Q64739 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Col11a2Q64739 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC22■■□□□ 1.11
Col11a2Q64739 Gm27389-201ENSMUST00000183622 195 ntBASIC22■■□□□ 1.11
Col11a2Q64739 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC22■■□□□ 1.11
Col11a2Q64739 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Col11a2Q64739 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms