Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AtmQ62388 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AtmQ62388 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AtmQ62388 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AtmQ62388 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AtmQ62388 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.15■□□□□ 0.34
AtmQ62388 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.15■□□□□ 0.34
AtmQ62388 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
AtmQ62388 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.15■□□□□ 0.34
AtmQ62388 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.15■□□□□ 0.34
AtmQ62388 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.15■□□□□ 0.34
AtmQ62388 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AtmQ62388 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.15■□□□□ 0.34
AtmQ62388 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AtmQ62388 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.34
AtmQ62388 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
AtmQ62388 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.14■□□□□ 0.33
AtmQ62388 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AtmQ62388 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.14■□□□□ 0.33
AtmQ62388 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AtmQ62388 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AtmQ62388 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AtmQ62388 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AtmQ62388 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
AtmQ62388 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AtmQ62388 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AtmQ62388 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AtmQ62388 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
AtmQ62388 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AtmQ62388 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AtmQ62388 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.13■□□□□ 0.33
AtmQ62388 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.13■□□□□ 0.33
AtmQ62388 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.13■□□□□ 0.33
AtmQ62388 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.13■□□□□ 0.33
AtmQ62388 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.13■□□□□ 0.33
AtmQ62388 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AtmQ62388 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AtmQ62388 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtmQ62388 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
AtmQ62388 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtmQ62388 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtmQ62388 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtmQ62388 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtmQ62388 Golph3-202ENSMUST00000226517 2359 ntBASIC17.12■□□□□ 0.33
AtmQ62388 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.12■□□□□ 0.33
AtmQ62388 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtmQ62388 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.12■□□□□ 0.33
AtmQ62388 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.12■□□□□ 0.33
AtmQ62388 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtmQ62388 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.12■□□□□ 0.33
AtmQ62388 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AtmQ62388 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtmQ62388 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
AtmQ62388 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AtmQ62388 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtmQ62388 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtmQ62388 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtmQ62388 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AtmQ62388 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtmQ62388 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtmQ62388 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtmQ62388 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtmQ62388 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
AtmQ62388 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AtmQ62388 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 Gm27463-201ENSMUST00000183569 57 ntBASIC17.1■□□□□ 0.33
AtmQ62388 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
AtmQ62388 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AtmQ62388 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms