Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.55■□□□□ 0.56
Six1Q62231 Gm7514-201ENSMUST00000209475 934 ntBASIC18.55■□□□□ 0.56
Six1Q62231 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Six1Q62231 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.54■□□□□ 0.56
Six1Q62231 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Six1Q62231 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.54■□□□□ 0.56
Six1Q62231 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Six1Q62231 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.54■□□□□ 0.56
Six1Q62231 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Six1Q62231 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Six1Q62231 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Six1Q62231 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Six1Q62231 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Six1Q62231 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six1Q62231 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six1Q62231 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.53■□□□□ 0.56
Six1Q62231 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six1Q62231 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six1Q62231 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six1Q62231 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six1Q62231 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.53■□□□□ 0.56
Six1Q62231 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Six1Q62231 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Six1Q62231 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Six1Q62231 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six1Q62231 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Six1Q62231 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Six1Q62231 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Six1Q62231 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.52■□□□□ 0.56
Six1Q62231 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.52■□□□□ 0.56
Six1Q62231 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Six1Q62231 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Six1Q62231 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Six1Q62231 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.51■□□□□ 0.55
Six1Q62231 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Six1Q62231 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Six1Q62231 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Six1Q62231 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.49■□□□□ 0.55
Six1Q62231 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.49■□□□□ 0.55
Six1Q62231 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.49■□□□□ 0.55
Six1Q62231 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.49■□□□□ 0.55
Six1Q62231 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Six1Q62231 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Six1Q62231 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms