Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VcanQ62059 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.06■□□□□ 0.32
VcanQ62059 Gm18733-201ENSMUST00000173950 856 ntBASIC17.06■□□□□ 0.32
VcanQ62059 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VcanQ62059 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VcanQ62059 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.05■□□□□ 0.32
VcanQ62059 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
VcanQ62059 Gm12085-201ENSMUST00000119263 940 ntBASIC17.05■□□□□ 0.32
VcanQ62059 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.05■□□□□ 0.32
VcanQ62059 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
VcanQ62059 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.05■□□□□ 0.32
VcanQ62059 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VcanQ62059 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VcanQ62059 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.05■□□□□ 0.32
VcanQ62059 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VcanQ62059 Gm28659-201ENSMUST00000188013 759 ntBASIC17.05■□□□□ 0.32
VcanQ62059 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VcanQ62059 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VcanQ62059 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.04■□□□□ 0.32
VcanQ62059 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Gm27459-201ENSMUST00000184860 107 ntBASIC17.04■□□□□ 0.32
VcanQ62059 Gm43347-201ENSMUST00000200226 580 ntBASIC17.04■□□□□ 0.32
VcanQ62059 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VcanQ62059 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VcanQ62059 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
VcanQ62059 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
VcanQ62059 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VcanQ62059 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VcanQ62059 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VcanQ62059 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Gm27742-201ENSMUST00000184667 60 ntBASIC17.03■□□□□ 0.32
VcanQ62059 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Gm27463-201ENSMUST00000183569 57 ntBASIC17.03■□□□□ 0.32
VcanQ62059 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
VcanQ62059 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.03■□□□□ 0.32
VcanQ62059 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
VcanQ62059 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VcanQ62059 Gm38285-201ENSMUST00000192928 922 ntBASIC17.02■□□□□ 0.32
VcanQ62059 Gm43438-201ENSMUST00000198133 379 ntBASIC17.02■□□□□ 0.32
VcanQ62059 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VcanQ62059 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.02■□□□□ 0.32
VcanQ62059 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.02■□□□□ 0.32
VcanQ62059 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VcanQ62059 Gm2274-201ENSMUST00000184539 609 ntBASIC17.02■□□□□ 0.32
VcanQ62059 Gm18206-201ENSMUST00000207027 926 ntBASIC17.02■□□□□ 0.32
VcanQ62059 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.02■□□□□ 0.32
VcanQ62059 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VcanQ62059 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VcanQ62059 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VcanQ62059 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VcanQ62059 Gm5864-201ENSMUST00000202263 970 ntBASIC17.02■□□□□ 0.31
VcanQ62059 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VcanQ62059 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VcanQ62059 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VcanQ62059 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VcanQ62059 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
VcanQ62059 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VcanQ62059 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VcanQ62059 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17■□□□□ 0.31
VcanQ62059 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17■□□□□ 0.31
VcanQ62059 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17■□□□□ 0.31
VcanQ62059 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VcanQ62059 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VcanQ62059 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17■□□□□ 0.31
VcanQ62059 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17■□□□□ 0.31
VcanQ62059 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17■□□□□ 0.31
VcanQ62059 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17■□□□□ 0.31
VcanQ62059 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17■□□□□ 0.31
VcanQ62059 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VcanQ62059 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms