Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ecm1Q61508 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ecm1Q61508 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ecm1Q61508 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.1■□□□□ 0.81
Ecm1Q61508 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ecm1Q61508 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ecm1Q61508 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ecm1Q61508 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ecm1Q61508 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ecm1Q61508 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.1■□□□□ 0.81
Ecm1Q61508 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ecm1Q61508 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ecm1Q61508 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ecm1Q61508 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Ecm1Q61508 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.09■□□□□ 0.81
Ecm1Q61508 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.09■□□□□ 0.81
Ecm1Q61508 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ecm1Q61508 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ecm1Q61508 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ecm1Q61508 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ecm1Q61508 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.08■□□□□ 0.81
Ecm1Q61508 Gm23634-201ENSMUST00000175071 91 ntBASIC20.08■□□□□ 0.81
Ecm1Q61508 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ecm1Q61508 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Ecm1Q61508 Gm7367-201ENSMUST00000057611 492 ntBASIC20.08■□□□□ 0.81
Ecm1Q61508 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ecm1Q61508 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ecm1Q61508 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ecm1Q61508 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ecm1Q61508 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ecm1Q61508 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ecm1Q61508 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ecm1Q61508 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ecm1Q61508 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ecm1Q61508 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ecm1Q61508 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.07■□□□□ 0.8
Ecm1Q61508 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.07■□□□□ 0.8
Ecm1Q61508 Gm10013-201ENSMUST00000106074 672 ntBASIC20.07■□□□□ 0.8
Ecm1Q61508 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ecm1Q61508 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ecm1Q61508 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.07■□□□□ 0.8
Ecm1Q61508 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ecm1Q61508 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ecm1Q61508 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ecm1Q61508 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ecm1Q61508 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ecm1Q61508 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ecm1Q61508 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ecm1Q61508 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ecm1Q61508 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ecm1Q61508 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ecm1Q61508 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ecm1Q61508 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.06■□□□□ 0.8
Ecm1Q61508 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.06■□□□□ 0.8
Ecm1Q61508 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ecm1Q61508 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Ecm1Q61508 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ecm1Q61508 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.06■□□□□ 0.8
Ecm1Q61508 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.06■□□□□ 0.8
Ecm1Q61508 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ecm1Q61508 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.05■□□□□ 0.8
Ecm1Q61508 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.05■□□□□ 0.8
Ecm1Q61508 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.05■□□□□ 0.8
Ecm1Q61508 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.05■□□□□ 0.8
Ecm1Q61508 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ecm1Q61508 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ecm1Q61508 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ecm1Q61508 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ecm1Q61508 Gm4974-201ENSMUST00000209974 875 ntBASIC20.04■□□□□ 0.8
Ecm1Q61508 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ecm1Q61508 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ecm1Q61508 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ecm1Q61508 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ecm1Q61508 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ecm1Q61508 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ecm1Q61508 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ecm1Q61508 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ecm1Q61508 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ecm1Q61508 Gm2274-201ENSMUST00000184539 609 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms