Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln3Q61124 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Cln3Q61124 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cln3Q61124 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cln3Q61124 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cln3Q61124 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.89■□□□□ 0.77
Cln3Q61124 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cln3Q61124 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cln3Q61124 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cln3Q61124 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cln3Q61124 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cln3Q61124 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cln3Q61124 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cln3Q61124 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cln3Q61124 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cln3Q61124 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cln3Q61124 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cln3Q61124 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cln3Q61124 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cln3Q61124 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cln3Q61124 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cln3Q61124 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cln3Q61124 Gm38027-201ENSMUST00000192315 235 ntBASIC19.87■□□□□ 0.77
Cln3Q61124 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.87■□□□□ 0.77
Cln3Q61124 Gm18032-201ENSMUST00000222541 538 ntBASIC19.87■□□□□ 0.77
Cln3Q61124 Gm7367-201ENSMUST00000057611 492 ntBASIC19.87■□□□□ 0.77
Cln3Q61124 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cln3Q61124 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cln3Q61124 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cln3Q61124 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.86■□□□□ 0.77
Cln3Q61124 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.86■□□□□ 0.77
Cln3Q61124 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cln3Q61124 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.86■□□□□ 0.77
Cln3Q61124 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cln3Q61124 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.86■□□□□ 0.77
Cln3Q61124 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cln3Q61124 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cln3Q61124 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.85■□□□□ 0.77
Cln3Q61124 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cln3Q61124 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Cln3Q61124 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cln3Q61124 Gm23634-201ENSMUST00000175071 91 ntBASIC19.85■□□□□ 0.77
Cln3Q61124 Gm45058-201ENSMUST00000205810 766 ntBASIC19.85■□□□□ 0.77
Cln3Q61124 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cln3Q61124 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cln3Q61124 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cln3Q61124 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cln3Q61124 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cln3Q61124 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.84■□□□□ 0.77
Cln3Q61124 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cln3Q61124 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cln3Q61124 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cln3Q61124 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cln3Q61124 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.84■□□□□ 0.77
Cln3Q61124 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cln3Q61124 BC021767-201ENSMUST00000126387 1716 ntBASIC19.84■□□□□ 0.77
Cln3Q61124 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cln3Q61124 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cln3Q61124 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cln3Q61124 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cln3Q61124 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cln3Q61124 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cln3Q61124 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cln3Q61124 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cln3Q61124 Gm27463-201ENSMUST00000183569 57 ntBASIC19.83■□□□□ 0.77
Cln3Q61124 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cln3Q61124 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cln3Q61124 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.83■□□□□ 0.76
Cln3Q61124 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Cln3Q61124 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cln3Q61124 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.82■□□□□ 0.76
Cln3Q61124 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cln3Q61124 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cln3Q61124 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms