Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Ptch1Q61115 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Ptch1Q61115 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ptch1Q61115 AC108858.1-201ENSMUST00000228461 1498 ntBASIC26.27■■□□□ 1.8
Ptch1Q61115 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ptch1Q61115 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ptch1Q61115 Golph3-202ENSMUST00000226517 2359 ntBASIC26.26■■□□□ 1.79
Ptch1Q61115 Gm24589-201ENSMUST00000116692 94 ntBASIC26.25■■□□□ 1.79
Ptch1Q61115 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC26.25■■□□□ 1.79
Ptch1Q61115 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Ptch1Q61115 Spsb2-203ENSMUST00000112473 1322 ntBASIC26.25■■□□□ 1.79
Ptch1Q61115 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ptch1Q61115 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
Ptch1Q61115 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Ptch1Q61115 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
Ptch1Q61115 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ptch1Q61115 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptch1Q61115 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptch1Q61115 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Ptch1Q61115 Mir3081-201ENSMUST00000175305 84 ntBASIC26.23■■□□□ 1.79
Ptch1Q61115 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC26.23■■□□□ 1.79
Ptch1Q61115 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Ptch1Q61115 Mzt1-203ENSMUST00000227948 952 ntBASIC26.23■■□□□ 1.79
Ptch1Q61115 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Ptch1Q61115 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptch1Q61115 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptch1Q61115 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Ptch1Q61115 Gm38345-201ENSMUST00000192635 1748 ntBASIC26.23■■□□□ 1.79
Ptch1Q61115 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptch1Q61115 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Ptch1Q61115 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC26.23■■□□□ 1.79
Ptch1Q61115 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ptch1Q61115 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
Ptch1Q61115 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC26.22■■□□□ 1.79
Ptch1Q61115 Gm18115-201ENSMUST00000221209 621 ntBASIC26.22■■□□□ 1.79
Ptch1Q61115 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ptch1Q61115 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ptch1Q61115 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ptch1Q61115 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ptch1Q61115 Gm11950-201ENSMUST00000121615 838 ntBASIC26.22■■□□□ 1.79
Ptch1Q61115 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ptch1Q61115 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ptch1Q61115 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Ptch1Q61115 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC26.22■■□□□ 1.79
Ptch1Q61115 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Ptch1Q61115 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ptch1Q61115 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ptch1Q61115 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ptch1Q61115 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ptch1Q61115 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC26.21■■□□□ 1.79
Ptch1Q61115 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ptch1Q61115 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC26.21■■□□□ 1.79
Ptch1Q61115 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC26.21■■□□□ 1.79
Ptch1Q61115 Gm24841-201ENSMUST00000158676 357 ntBASIC26.21■■□□□ 1.79
Ptch1Q61115 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Ptch1Q61115 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
Ptch1Q61115 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
Ptch1Q61115 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
Ptch1Q61115 Gm18958-201ENSMUST00000174258 762 ntBASIC26.2■■□□□ 1.78
Ptch1Q61115 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ptch1Q61115 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ptch1Q61115 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ptch1Q61115 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptch1Q61115 Gm18688-201ENSMUST00000204695 1859 ntBASIC26.19■■□□□ 1.78
Ptch1Q61115 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptch1Q61115 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Ptch1Q61115 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptch1Q61115 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptch1Q61115 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptch1Q61115 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC26.19■■□□□ 1.78
Ptch1Q61115 Gm34391-201ENSMUST00000203706 907 ntBASIC26.19■■□□□ 1.78
Ptch1Q61115 Gm7213-201ENSMUST00000215977 950 ntBASIC26.19■■□□□ 1.78
Ptch1Q61115 Otx2os1-206ENSMUST00000228153 787 ntBASIC26.19■■□□□ 1.78
Ptch1Q61115 Gm5867-201ENSMUST00000063197 592 ntBASIC26.19■■□□□ 1.78
Ptch1Q61115 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ptch1Q61115 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptch1Q61115 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ptch1Q61115 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ptch1Q61115 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Ptch1Q61115 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC26.18■■□□□ 1.78
Ptch1Q61115 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ptch1Q61115 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
Ptch1Q61115 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ptch1Q61115 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC26.17■■□□□ 1.78
Ptch1Q61115 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
Ptch1Q61115 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ptch1Q61115 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch1Q61115 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ptch1Q61115 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
Ptch1Q61115 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Ptch1Q61115 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms