Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdf4Q61112 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.34■□□□□ 0.53
Sdf4Q61112 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sdf4Q61112 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.34■□□□□ 0.53
Sdf4Q61112 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.34■□□□□ 0.53
Sdf4Q61112 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sdf4Q61112 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.34■□□□□ 0.53
Sdf4Q61112 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdf4Q61112 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sdf4Q61112 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sdf4Q61112 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdf4Q61112 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdf4Q61112 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdf4Q61112 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdf4Q61112 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdf4Q61112 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdf4Q61112 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sdf4Q61112 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sdf4Q61112 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdf4Q61112 Gm44549-201ENSMUST00000208351 577 ntBASIC18.33■□□□□ 0.52
Sdf4Q61112 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.33■□□□□ 0.52
Sdf4Q61112 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdf4Q61112 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdf4Q61112 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdf4Q61112 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.32■□□□□ 0.52
Sdf4Q61112 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sdf4Q61112 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.32■□□□□ 0.52
Sdf4Q61112 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sdf4Q61112 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sdf4Q61112 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sdf4Q61112 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdf4Q61112 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdf4Q61112 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Sdf4Q61112 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdf4Q61112 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.31■□□□□ 0.52
Sdf4Q61112 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.31■□□□□ 0.52
Sdf4Q61112 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.31■□□□□ 0.52
Sdf4Q61112 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdf4Q61112 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdf4Q61112 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdf4Q61112 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdf4Q61112 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Sdf4Q61112 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdf4Q61112 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdf4Q61112 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdf4Q61112 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdf4Q61112 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdf4Q61112 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sdf4Q61112 Gm2399-201ENSMUST00000104944 225 ntBASIC18.3■□□□□ 0.52
Sdf4Q61112 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sdf4Q61112 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sdf4Q61112 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Sdf4Q61112 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdf4Q61112 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdf4Q61112 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdf4Q61112 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sdf4Q61112 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.29■□□□□ 0.52
Sdf4Q61112 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Sdf4Q61112 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.29■□□□□ 0.52
Sdf4Q61112 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdf4Q61112 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sdf4Q61112 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sdf4Q61112 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdf4Q61112 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms