Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ClpbQ60649 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ClpbQ60649 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.33■□□□□ 0.36
ClpbQ60649 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClpbQ60649 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.33■□□□□ 0.36
ClpbQ60649 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ClpbQ60649 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClpbQ60649 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClpbQ60649 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.33■□□□□ 0.36
ClpbQ60649 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClpbQ60649 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClpbQ60649 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ClpbQ60649 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ClpbQ60649 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ClpbQ60649 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ClpbQ60649 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClpbQ60649 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClpbQ60649 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ClpbQ60649 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
ClpbQ60649 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.31■□□□□ 0.36
ClpbQ60649 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
ClpbQ60649 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.31■□□□□ 0.36
ClpbQ60649 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Gm26524-201ENSMUST00000192339 390 ntBASIC17.31■□□□□ 0.36
ClpbQ60649 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.31■□□□□ 0.36
ClpbQ60649 Rab3c-203ENSMUST00000224180 967 ntBASIC17.31■□□□□ 0.36
ClpbQ60649 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.31■□□□□ 0.36
ClpbQ60649 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ClpbQ60649 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ClpbQ60649 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClpbQ60649 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ClpbQ60649 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.3■□□□□ 0.36
ClpbQ60649 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.3■□□□□ 0.36
ClpbQ60649 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.3■□□□□ 0.36
ClpbQ60649 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ClpbQ60649 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClpbQ60649 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClpbQ60649 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClpbQ60649 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.29■□□□□ 0.36
ClpbQ60649 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClpbQ60649 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.29■□□□□ 0.36
ClpbQ60649 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.29■□□□□ 0.36
ClpbQ60649 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClpbQ60649 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClpbQ60649 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.29■□□□□ 0.36
ClpbQ60649 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.29■□□□□ 0.36
ClpbQ60649 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClpbQ60649 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClpbQ60649 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ClpbQ60649 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.29■□□□□ 0.36
ClpbQ60649 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
ClpbQ60649 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClpbQ60649 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.28■□□□□ 0.36
ClpbQ60649 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ClpbQ60649 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ClpbQ60649 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.28■□□□□ 0.36
ClpbQ60649 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.28■□□□□ 0.36
ClpbQ60649 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ClpbQ60649 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ClpbQ60649 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClpbQ60649 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClpbQ60649 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ClpbQ60649 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClpbQ60649 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ClpbQ60649 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClpbQ60649 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClpbQ60649 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.27■□□□□ 0.36
ClpbQ60649 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms