Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Xrcc1Q60596 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Xrcc1Q60596 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Xrcc1Q60596 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Gm20760-201ENSMUST00000179197 648 ntBASIC17.28■□□□□ 0.36
Xrcc1Q60596 Gm27275-201ENSMUST00000184318 272 ntBASIC17.28■□□□□ 0.36
Xrcc1Q60596 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.28■□□□□ 0.36
Xrcc1Q60596 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Xrcc1Q60596 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Xrcc1Q60596 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Xrcc1Q60596 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.27■□□□□ 0.36
Xrcc1Q60596 Gm11249-201ENSMUST00000117071 859 ntBASIC17.27■□□□□ 0.36
Xrcc1Q60596 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.27■□□□□ 0.36
Xrcc1Q60596 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.27■□□□□ 0.36
Xrcc1Q60596 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Xrcc1Q60596 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Xrcc1Q60596 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Xrcc1Q60596 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Xrcc1Q60596 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Xrcc1Q60596 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Xrcc1Q60596 Gm11927-201ENSMUST00000118472 759 ntBASIC17.26■□□□□ 0.35
Xrcc1Q60596 Trmt13-210ENSMUST00000198454 880 ntBASIC17.26■□□□□ 0.35
Xrcc1Q60596 Zfp783-201ENSMUST00000095946 670 ntBASIC17.26■□□□□ 0.35
Xrcc1Q60596 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Xrcc1Q60596 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Xrcc1Q60596 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Xrcc1Q60596 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Xrcc1Q60596 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Xrcc1Q60596 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Xrcc1Q60596 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Xrcc1Q60596 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Xrcc1Q60596 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Xrcc1Q60596 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Xrcc1Q60596 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Xrcc1Q60596 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Xrcc1Q60596 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.24■□□□□ 0.35
Xrcc1Q60596 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Xrcc1Q60596 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Xrcc1Q60596 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Xrcc1Q60596 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.24■□□□□ 0.35
Xrcc1Q60596 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.24■□□□□ 0.35
Xrcc1Q60596 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Xrcc1Q60596 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Xrcc1Q60596 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Xrcc1Q60596 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.23■□□□□ 0.35
Xrcc1Q60596 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Xrcc1Q60596 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.22■□□□□ 0.35
Xrcc1Q60596 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Gm38285-201ENSMUST00000192928 922 ntBASIC17.22■□□□□ 0.35
Xrcc1Q60596 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Xrcc1Q60596 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms