Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pabpn1lQ5XFR0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pabpn1lQ5XFR0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pabpn1lQ5XFR0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pabpn1lQ5XFR0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pabpn1lQ5XFR0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1lQ5XFR0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Pabpn1lQ5XFR0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.08■□□□□ 0.49
Pabpn1lQ5XFR0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1lQ5XFR0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1lQ5XFR0 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.08■□□□□ 0.49
Pabpn1lQ5XFR0 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.08■□□□□ 0.49
Pabpn1lQ5XFR0 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.08■□□□□ 0.49
Pabpn1lQ5XFR0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
Pabpn1lQ5XFR0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1lQ5XFR0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.08■□□□□ 0.48
Pabpn1lQ5XFR0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.08■□□□□ 0.48
Pabpn1lQ5XFR0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pabpn1lQ5XFR0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1lQ5XFR0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1lQ5XFR0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pabpn1lQ5XFR0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1lQ5XFR0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1lQ5XFR0 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1lQ5XFR0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Pabpn1lQ5XFR0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Pabpn1lQ5XFR0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pabpn1lQ5XFR0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pabpn1lQ5XFR0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pabpn1lQ5XFR0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pabpn1lQ5XFR0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.05■□□□□ 0.48
Pabpn1lQ5XFR0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pabpn1lQ5XFR0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pabpn1lQ5XFR0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pabpn1lQ5XFR0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms